Transcript: ENSDART00000149479.2 CHST10-204

Description

carbohydrate sulfotransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040808-40]

Location

Chromosome 1: 28,031,754-28,036,471 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 119 variant alleles and maps to 62 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000031632.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000047211.8	CHST10-206	1798	365aa	ENSDARP00000047210.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187922.1	CHST10-207	2014	375aa	ENSDARP00000151627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QDC0	-
ENSDART00000149785.3	CHST10-202	814	246aa	ENSDARP00000124712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149479.2	CHST10-204	703	170aa	ENSDARP00000125022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149817.3	CHST10-203	588	139aa	ENSDARP00000124388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133844.3	CHST10-205	789	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000149420.2	CHST10-201	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 703 bps, Translation length: 170 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149479.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149479.2 CHST10-204

Summary

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Transcript: ENSDART00000149479.2 CHST10-204

Summary

About Us

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