Transcript: ENSDART00000149434.3 tulp1a-204

Description

TUB like protein 1a [Source:ZFIN;Acc:ZDB-GENE-110411-122]

Location

Chromosome 23: 5,465,806-5,482,188 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 512 variant alleles and maps to 8 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000075295.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000110522.5	tulp1a-201	2060	506aa	ENSDARP00000099556.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175403.2	tulp1a-205	4209	88aa	ENSDARP00000144100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000148506.3	tulp1a-202	968	262aa	ENSDARP00000124662.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149050.3	tulp1a-203	718	216aa	ENSDARP00000133220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149434.3	tulp1a-204	561	141aa	ENSDARP00000124538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 561 bps, Translation length: 141 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149434.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149434.3 tulp1a-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000149434.3 tulp1a-204

Summary

About Us

Get help

Our sister sites

Follow us