Transcript: ENSDART00000149412.2 smyd1a-202

Description

SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]

Gene Synonyms

sb:cb405, smyd1, wu:fc09a05

Location

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 326 variant alleles and maps to 81 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027811.10	smyd1a-201	6821	465aa	ENSDARP00000027046.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDG9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149412.2	smyd1a-202	1195	385aa	ENSDARP00000123858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4X0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,195 bps, Translation length: 385 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149412.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.