Transcript: ENSDART00000149410.3 psip1b-204

Description

PC4 and SFRS1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3273]

Location

About this transcript

This transcript has 13 exons, is annotated with 47 domains and features, is associated with 21 variant alleles and maps to 155 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000190476.1	psip1b-205	7828	1559aa	ENSDARP00000153130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000149410.3	psip1b-204	5566	1525aa	ENSDARP00000124540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9P5P4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000004357.8	psip1b-201	4494	1497aa	ENSDARP00000010777.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000111126.4	psip1b-203	4494	1497aa	ENSDARP00000098814.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000193560.1	psip1b-206	4494	1497aa	ENSDARP00000147019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000102441.5	psip1b-202	2274	758aa	ENSDARP00000093218.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 5,566 bps, Translation length: 1,525 residues

Version

ENSDART00000149410.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.