Transcript: ENSDART00000149402.2 tmc6a-202

Description

transmembrane channel-like 6a [Source:ZFIN;Acc:ZDB-GENE-081114-3]

Gene Synonyms

tmc6

Location

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 325 variant alleles and maps to 126 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101839.5	tmc6a-201	2379	792aa	ENSDARP00000092615.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6K2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149402.2	tmc6a-202	1283	359aa	ENSDARP00000124750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2F3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,283 bps, Translation length: 359 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000149402.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.