Transcript: ENSDART00000149326.2 USH1G-201

Description

Usher syndrome 1Gb (autosomal recessive) [Source:ZFIN;Acc:ZDB-GENE-110411-55]

Location

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 448 variant alleles and maps to 65 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189402.1	USH1G-202	2038	488aa	ENSDARP00000156275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8N7T6J6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149326.2	USH1G-201	1188	392aa	ENSDARP00000123939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,188 bps, Translation length: 392 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149326.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]