Transcript: ENSDART00000149318.2 zgc:158659-203

Description

zgc:158659 [Source:ZFIN;Acc:ZDB-GENE-070112-492]

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 451 variant alleles and maps to 80 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149115.3	zgc:158659-202	3412	1070aa	ENSDARP00000124781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2C2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186276.1	zgc:158659-205	1908	635aa	ENSDARP00000152744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QDB9	-
ENSDART00000085528.6	zgc:158659-201	1615	287aa	ENSDARP00000079963.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZY0	-
ENSDART00000185874.1	zgc:158659-204	868	287aa	ENSDARP00000145603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZY0	-
ENSDART00000149318.2	zgc:158659-203	665	190aa	ENSDARP00000124338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3P4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 665 bps, Translation length: 190 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149318.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.