Transcript: ENSDART00000149285.2 erbb3a-204

Description

erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]

Gene Synonyms

erbb3, im:7148890, si:dz150i12.1

Location

Chromosome 6: 7,507,390-7,511,762 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 287 variant alleles and maps to 13 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000006202.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148908.3	erbb3a-203	6282	1319aa	ENSDARP00000124007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3W7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000014892.9	erbb3a-201	3918	1305aa	ENSDARP00000002603.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSK6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000149285.2	erbb3a-204	412	138aa	ENSDARP00000124619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2T0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000150046.2	erbb3a-205	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148559.2	erbb3a-202	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 412 bps, Translation length: 138 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000149285.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149285.2 erbb3a-204

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Transcript: ENSDART00000149285.2 erbb3a-204

Summary

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