Transcript: ENSDART00000149268.3 NR4A2-201

Description

nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]

Location

Chromosome 9: 5,042,034-5,045,378 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 50 domains and features, is associated with 267 variant alleles and maps to 121 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000017007.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109954.4	NR4A2-203	3798	635aa	ENSDARP00000100256.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000179087.2	NR4A2-204	3656	598aa	ENSDARP00000144147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R9YJF7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149268.3	NR4A2-201	2153	598aa	ENSDARP00000124937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R9YJF7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149697.2	NR4A2-202	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,153 bps, Translation length: 598 residues

Version

ENSDART00000149268.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149268.3 NR4A2-201

Summary

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Transcript: ENSDART00000149268.3 NR4A2-201

Summary

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