Transcript: ENSDART00000149250.3 PHKB-201

Description

phosphorylase kinase, beta [Source:ZFIN;Acc:ZDB-GENE-110411-149]

Location

Chromosome 7: 42,206,847-42,264,849 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 3 domains and features, is associated with 471 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078284.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112543.4	PHKB-203	4439	1087aa	ENSDARP00000103850.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6F0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000148643.4	PHKB-204	3255	1084aa	ENSDARP00000124602.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2U7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000149250.3	PHKB-201	917	271aa	ENSDARP00000125070.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149082.2	PHKB-202	865	288aa	ENSDARP00000124795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 917 bps, Translation length: 271 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149250.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149250.3 PHKB-201

Summary

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Transcript: ENSDART00000149250.3 PHKB-201

Summary

About Us

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