Transcript: ENSDART00000149220.2 abcc8-203

Description

ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050517-22]

Gene Synonyms

zSur1

Location

Chromosome 25: 22,821,376-22,839,815 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 19 domains and features, is associated with 846 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000051879.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149455.3	abcc8-204	4746	1581aa	ENSDARP00000124481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W367	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000088422.6	abcc8-201	5636	1594aa	ENSDARP00000082855.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMZ9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000149220.2	abcc8-203	1401	467aa	ENSDARP00000124152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2HX27	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000149161.3	abcc8-202	4850	200aa	ENSDARP00000124116.1	Nonsense mediated decay	F8W4W3	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,401 bps, Translation length: 467 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000149220.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149220.2 abcc8-203

Summary

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Transcript: ENSDART00000149220.2 abcc8-203

Summary

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