Transcript: ENSDART00000149216.2 gtf2ird1-202

Description

GTF2I repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-010328-18]

Gene Synonyms

si:dkey-32e10.2, si:dkey-32e10.4-001

Location

About this transcript

This transcript has 2 exons, is associated with 56 variant alleles and maps to 20 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148727.3	gtf2ird1-201	5229	982aa	ENSDARP00000123826.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W502	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189341.1	gtf2ird1-203	351	116aa	ENSDARP00000146888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PZZ4	-
ENSDART00000149216.2	gtf2ird1-202	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 535 bps,

Version

ENSDART00000149216.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.