Transcript: ENSDART00000149161.3 ABCC8-201

Description

ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050517-22]

Location

About this transcript

This transcript has 39 exons, is associated with 4173 variant alleles and maps to 131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149455.3	ABCC8-202	4746	1581aa	ENSDARP00000124481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000088422.6	ABCC8-204	5636	1594aa	ENSDARP00000082855.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMZ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149220.2	ABCC8-203	1401	467aa	ENSDARP00000124152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000149161.3	ABCC8-201	4850	200aa	ENSDARP00000124116.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 39, Coding exons: 5, Transcript length: 4,850 bps, Translation length: 200 residues

Version

ENSDART00000149161.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.