Transcript: ENSDART00000149160.3 ccl38.6-204

Description

chemokine (C-C motif) ligand 38, duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-041014-165]

Location

Chromosome 20: 38,257,818-38,291,952 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 1122 variant alleles and maps to 43 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000041923.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000061434.6	ccl38.6-201	501	166aa	ENSDARP00000061433.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F787	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000147485.3	ccl38.6-203	1036	103aa	ENSDARP00000120680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYP6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149160.3	ccl38.6-204	849	158aa	ENSDARP00000123921.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4J0	-
ENSDART00000061437.7	ccl38.6-202	616	103aa	ENSDARP00000061436.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYP6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 849 bps, Translation length: 158 residues

Version

ENSDART00000149160.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149160.3 ccl38.6-204

Summary

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Transcript: ENSDART00000149160.3 ccl38.6-204

Summary

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