Transcript: ENSDART00000149159.2 capza1a-202

Description

capping actin protein of muscle Z-line subunit alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5237]

Gene Synonyms

capza1, wu:fa19e05, wu:fk22d04, zgc:56314, zgc:85654

Location

About this transcript

This transcript has 1 exon, is associated with 118 variant alleles and maps to 6 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046973.8	capza1a-201	2885	286aa	ENSDARP00000046972.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NWK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149159.2	capza1a-202	75	13aa	ENSDARP00000123699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5D9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 75 bps, Translation length: 13 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149159.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.