Transcript: ENSDART00000149140.2 zpld1a-201

Description

zona pellucida-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-110411-81]

Gene Synonyms

si:ch211-103f14.2, zpDL1

Location

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 449 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149140.2	zpld1a-201	1328	440aa	ENSDARP00000124521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W328	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000162016.2	zpld1a-202	2049	411aa	ENSDARP00000139723.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITH5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,328 bps, Translation length: 440 residues

Version

ENSDART00000149140.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]