Transcript: ENSDART00000149085.3 HNF1B-201

Description

HNF1 homeobox Bb [Source:ZFIN;Acc:ZDB-GENE-030131-3003]

Location

About this transcript

This transcript has 6 exons, is annotated with 23 domains and features, is associated with 321 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000177616.2	HNF1B-202	4162	532aa	ENSDARP00000143259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8UW00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149085.3	HNF1B-201	1439	443aa	ENSDARP00000125092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,439 bps, Translation length: 443 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149085.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.