Transcript: ENSDART00000149079.3 sagb-203

Description

S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]

Location

About this transcript

This transcript has 13 exons, is annotated with 14 domains and features, is associated with 467 variant alleles and maps to 94 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000157750.3	sagb-205	1166	385aa	ENSDARP00000139166.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149079.3	sagb-203	1088	347aa	ENSDARP00000123973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000055995.6	sagb-201	808	176aa	ENSDARP00000055994.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000149361.3	sagb-204	733	208aa	ENSDARP00000124955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149029.3	sagb-202	582	59aa	ENSDARP00000124474.1	Nonsense mediated decay	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,088 bps, Translation length: 347 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000149079.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.