Transcript: ENSDART00000149058.2 POLE4-202

Description

polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]

Location

About this transcript

This transcript has 3 exons, is associated with 232 variant alleles and maps to 59 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000019440.9	POLE4-201	2192	179aa	ENSDARP00000016362.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCI6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000148246.3	POLE4-204	729	127aa	ENSDARP00000119014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1P5S3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150199.3	POLE4-203	550	113aa	ENSDARP00000125078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000149587.3	POLE4-205	743	118aa	ENSDARP00000124578.1	Nonsense mediated decay	-	-
ENSDART00000149058.2	POLE4-202	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 561 bps,

Version

ENSDART00000149058.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.