Transcript: ENSDART00000149009.2 PTK2B-202

Description

protein tyrosine kinase 2 beta, b [Source:ZFIN;Acc:ZDB-GENE-020507-1]

Location

About this transcript

This transcript has 5 exons, is associated with 333 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057819.8	PTK2B-201	3790	1004aa	ENSDARP00000057818.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T2P8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161579.2	PTK2B-203	3709	1004aa	ENSDARP00000141667.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T2P8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149009.2	PTK2B-202	500	65aa	ENSDARP00000124857.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 500 bps, Translation length: 65 residues

Version

ENSDART00000149009.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.