Transcript: ENSDART00000148998.2 atad2b-202

Description

ATPase family AAA domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110411-210]

Gene Synonyms

si:ch73-97d3.2

Location

About this transcript

This transcript has 3 exons, is associated with 256 variant alleles and maps to 11 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085416.6	atad2b-201	4164	1387aa	ENSDARP00000079851.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FE14	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149000.3	atad2b-203	2767	878aa	ENSDARP00000124922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5Z5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149775.2	atad2b-204	630	166aa	ENSDARP00000124818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W286	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148998.2	atad2b-202	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 535 bps,

Version

ENSDART00000148998.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.