Transcript: ENSDART00000148993.3 HDAC6-201

Description

histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]

Location

About this transcript

This transcript has 28 exons, is annotated with 28 domains and features, is associated with 960 variant alleles and maps to 150 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148993.3	HDAC6-201	3951	1081aa	ENSDARP00000124246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4B7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180659.1	HDAC6-203	3246	1081aa	ENSDARP00000153983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4B7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149671.2	HDAC6-202	418	33aa	ENSDARP00000124512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 28, Coding exons: 27, Transcript length: 3,951 bps, Translation length: 1,081 residues

Version

ENSDART00000148993.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.