Transcript: ENSDART00000148961.2 s100a10b-202

Description

S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]

Location

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 141 variant alleles and maps to 184 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148961.2	s100a10b-202	862	100aa	ENSDARP00000124401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000037694.7	s100a10b-201	576	100aa	ENSDARP00000033294.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVA4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149053.2	s100a10b-203	452	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 862 bps, Translation length: 100 residues

Version

ENSDART00000148961.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.