Transcript: ENSDART00000148930.2 lingo4b-202

Description

leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]

Location

About this transcript

This transcript has 3 exons, is annotated with 42 domains and features, is associated with 14 variant alleles and maps to 171 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148930.2	lingo4b-202	3031	604aa	ENSDARP00000124928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KH16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000047931.6	lingo4b-201	1889	604aa	ENSDARP00000047930.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KH16	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 3,031 bps, Translation length: 604 residues

Version

ENSDART00000148930.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.