Transcript: ENSDART00000148908.3 ERBB3-202

Description

erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]

Location

Chromosome 6: 7,466,223-7,531,427 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 54 domains and features, is associated with 1963 variant alleles and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000006202.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000148908.3	ERBB3-202	6282	1319aa	ENSDARP00000124007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000014892.9	ERBB3-205	3918	1305aa	ENSDARP00000002603.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000149285.2	ERBB3-201	412	138aa	ENSDARP00000124619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000150046.2	ERBB3-203	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000148559.2	ERBB3-204	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 6,282 bps, Translation length: 1,319 residues

Version

ENSDART00000148908.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148908.3 ERBB3-202

Summary

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Transcript: ENSDART00000148908.3 ERBB3-202

Summary

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