Transcript: ENSDART00000148877.3 NELFE-204

Description

negative elongation factor complex member E [Source:ZFIN;Acc:ZDB-GENE-040718-69]

Location

Chromosome 19: 26,923,288-26,931,994 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 231 variant alleles and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004343.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148877.3	NELFE-204	1638	346aa	ENSDARP00000124545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187396.1	NELFE-205	3119	394aa	ENSDARP00000154852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000188978.1	NELFE-206	2928	346aa	ENSDARP00000150604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWQ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148439.3	NELFE-203	1202	322aa	ENSDARP00000124298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149988.3	NELFE-202	779	190aa	ENSDARP00000124636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148613.2	NELFE-201	322	71aa	ENSDARP00000124025.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,638 bps, Translation length: 346 residues

Version

ENSDART00000148877.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000148877.3 NELFE-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000148877.3 NELFE-204

Summary

About Us

Get help

Our sister sites

Follow us