Transcript: ENSDART00000148803.2 sox2ot-201

Description

SOX2 overlapping transcript [Source:ZFIN;Acc:ZDB-LNCRNAG-091125-1]

Location

About this transcript

This transcript has 2 exons, is associated with 1223 variant alleles and maps to 1 oligo probe.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000149948.3	sox2ot-204	522	No protein	-	A long non-coding transcript that contains a coding gene in its intron on the same strand.Sense overlapping	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000149567.2	sox2ot-203	504	No protein	-	A long non-coding transcript that contains a coding gene in its intron on the same strand.Sense overlapping	-
ENSDART00000149037.2	sox2ot-202	503	No protein	-	A long non-coding transcript that contains a coding gene in its intron on the same strand.Sense overlapping	-
ENSDART00000148803.2	sox2ot-201	400	No protein	-	A long non-coding transcript that contains a coding gene in its intron on the same strand.Sense overlapping	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 400 bps,

Version

ENSDART00000148803.2

Type

Sense overlapping

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.