Transcript: ENSDART00000148795.2 dpf2-205

Description

D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]

Gene Synonyms

im:7146797, zgc:101789

Location

Chromosome 5: 37,747,128-37,749,878 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 417 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000012219.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014031.11	dpf2-201	1708	400aa	ENSDARP00000003264.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PF46	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148586.2	dpf2-203	539	180aa	ENSDARP00000124853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W251	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000148795.2	dpf2-205	486	156aa	ENSDARP00000124500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W348	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148766.3	dpf2-204	997	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148549.2	dpf2-202	509	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148842.2	dpf2-206	421	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 486 bps, Translation length: 156 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148795.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148795.2 dpf2-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000148795.2 dpf2-205

Summary

About Us

Get help

Our sister sites

Follow us