Transcript: ENSDART00000148782.2 cyp2r1-203

Description

cytochrome P450, family 2, subfamily R, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-110114-1]

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 1317 variant alleles and maps to 104 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079091.4	cyp2r1-201	2317	506aa	ENSDARP00000073546.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P2A1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148417.3	cyp2r1-202	886	229aa	ENSDARP00000125033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5N4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148782.2	cyp2r1-203	813	190aa	ENSDARP00000123917.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4J4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149496.2	cyp2r1-204	314	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 813 bps, Translation length: 190 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148782.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.