Transcript: ENSDART00000148781.3 dlgap4a-203

Description

discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]

Gene Synonyms

dlgap4, zgc:171808

Location

About this transcript

This transcript has 7 exons, is associated with 603 variant alleles and maps to 305 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000086156.7	dlgap4a-201	2558	275aa	ENSDARP00000080591.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6W2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148500.3	dlgap4a-202	2576	526aa	ENSDARP00000124605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2U4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000148781.3	dlgap4a-203	2580	208aa	ENSDARP00000124802.1	Nonsense mediated decay	F8W2A1	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 2,580 bps, Translation length: 208 residues

Version

ENSDART00000148781.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.