Transcript: ENSDART00000148730.2 CSRP1-202

Description

cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]

Location

About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 1481 variant alleles and maps to 47 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000019455.8	CSRP1-203	2739	192aa	ENSDARP00000002532.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NZV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131521.3	CSRP1-201	908	113aa	ENSDARP00000125029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000148730.2	CSRP1-202	550	167aa	ENSDARP00000124015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 550 bps, Translation length: 167 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148730.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.