Transcript: ENSDART00000148719.3 scpp9-202

Description

secretory calcium-binding phosphoprotein 9 [Source:ZFIN;Acc:ZDB-GENE-090424-3]

Location

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 85 variant alleles and maps to 55 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129813.2	scpp9-201	904	183aa	ENSDARP00000104811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B9UIU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148719.3	scpp9-202	887	183aa	ENSDARP00000124193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B9UIU6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 887 bps, Translation length: 183 residues

Version

ENSDART00000148719.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.