Transcript: ENSDART00000148703.3 aimp1b-202

Description

aminoacyl tRNA synthetase complex interacting multifunctional protein 1b [Source:ZFIN;Acc:ZDB-GENE-041212-13]

Gene Synonyms

zgc:101853

Location

Chromosome 23: 45,402,277-45,407,642 reverse strand.

About this transcript

This transcript has 8 exons, is associated with 105 variant alleles and maps to 137 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000036894.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150186.3	aimp1b-205	1145	346aa	ENSDARP00000124114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4W5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148484.2	aimp1b-201	818	273aa	ENSDARP00000124478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W370	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000149462.3	aimp1b-204	621	186aa	ENSDARP00000124161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4R7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000148703.3	aimp1b-202	953	43aa	ENSDARP00000123956.1	Nonsense mediated decay	F8W487	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000149291.2	aimp1b-203	818	49aa	ENSDARP00000124444.1	Nonsense mediated decay	F8W3A3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 2, Transcript length: 953 bps, Translation length: 43 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000148703.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148703.3 aimp1b-202

Summary

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Transcript: ENSDART00000148703.3 aimp1b-202

Summary

About Us

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