Transcript: ENSDART00000148662.3 kcnc3a-202

Description

potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]

Location

Chromosome 3: 31,961,489-32,032,751 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 55 domains and features, is associated with 1541 variant alleles and maps to 113 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055855.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148662.3	kcnc3a-202	1929	642aa	ENSDARP00000124513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1AZA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000078249.6	kcnc3a-201	2320	626aa	ENSDARP00000072711.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PW22	-
ENSDART00000148861.3	kcnc3a-203	2080	659aa	ENSDARP00000124090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1AZA5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000163158.2	kcnc3a-204	1980	659aa	ENSDARP00000138260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1AZA5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,929 bps, Translation length: 642 residues

Version

ENSDART00000148662.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000148662.3 kcnc3a-202

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Transcript: ENSDART00000148662.3 kcnc3a-202

Summary

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