Transcript: ENSDART00000148566.3 pdhx-202

Description

pyruvate dehydrogenase complex, component X [Source:ZFIN;Acc:ZDB-GENE-040426-1539]

Gene Synonyms

zgc:66110, zgc:85977

Location

Chromosome 25: 37,428,187-37,435,071 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 22 domains and features, is associated with 243 variant alleles and maps to 181 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000051756.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102855.4	pdhx-201	1822	496aa	ENSDARP00000093629.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0J8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000148566.3	pdhx-202	1812	489aa	ENSDARP00000124646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NW45	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000149763.2	pdhx-203	638	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,812 bps, Translation length: 489 residues

Version

ENSDART00000148566.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000148566.3 pdhx-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000148566.3 pdhx-202

Summary

About Us

Get help

Our sister sites

Follow us