Transcript: ENSDART00000148564.3 csmd3a-202

Description

CUB and Sushi multiple domains 3a [Source:ZFIN;Acc:ZDB-GENE-050419-118]

Gene Synonyms

si:ch211-236p22.1, si:ch73-211l23.1

Location

About this transcript

This transcript has 34 exons, is annotated with 126 domains and features, is associated with 3526 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186694.1	csmd3a-204	10668	3555aa	ENSDARP00000155415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QQM9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000187258.1	csmd3a-205	10470	3489aa	ENSDARP00000148778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q6V6	-
ENSDART00000148564.3	csmd3a-202	5395	1798aa	ENSDARP00000124328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3Q4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000143582.3	csmd3a-201	4900	1633aa	ENSDARP00000114782.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDI2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000149002.2	csmd3a-203	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 34, Coding exons: 34, Transcript length: 5,395 bps, Translation length: 1,798 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000148564.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]