Transcript: ENSDART00000148563.2 EPHA4-202

Description

eph receptor A4a [Source:ZFIN;Acc:ZDB-GENE-001207-7]

Location

About this transcript

This transcript has 3 exons, is annotated with 16 domains and features, is associated with 175 variant alleles and maps to 19 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000149895.4	EPHA4-201	3387	995aa	ENSDARP00000123962.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000098632.5	EPHA4-205	4795	937aa	ENSDARP00000089403.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000176951.2	EPHA4-204	2961	986aa	ENSDARP00000143572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148563.2	EPHA4-202	985	318aa	ENSDARP00000124775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173665.2	EPHA4-203	1693	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 985 bps, Translation length: 318 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000148563.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.