Transcript: ENSDART00000148562.3 thbs2b-201

Description

thrombospondin 2b [Source:ZFIN;Acc:ZDB-GENE-100623-1]

Location

About this transcript

This transcript has 21 exons, is annotated with 76 domains and features, is associated with 817 variant alleles and maps to 84 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148562.3	thbs2b-201	4419	1181aa	ENSDARP00000124912.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3B7K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179355.2	thbs2b-203	3519	1172aa	ENSDARP00000143480.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000148747.2	thbs2b-202	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 4,419 bps, Translation length: 1,181 residues

Version

ENSDART00000148562.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.