Transcript: ENSDART00000148561.2 xirp2b-202

Description

xin actin binding repeat containing 2b [Source:ZFIN;Acc:ZDB-GENE-030521-26]

Gene Synonyms

Xin betaNA, sb:cb526, xirp2l

Location

Chromosome 9: 49,459,577-49,493,305 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 49 domains and features, is associated with 757 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000091090.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000121875.3	xirp2b-201	10131	3250aa	ENSDARP00000105380.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QP52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000181471.1	xirp2b-205	12933	3003aa	ENSDARP00000147479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q317	-
ENSDART00000186293.1	xirp2b-206	12694	3147aa	ENSDARP00000152949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RU90	-
ENSDART00000148561.2	xirp2b-202	5431	1811aa	ENSDARP00000124952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5W5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000148707.3	xirp2b-203	770	257aa	ENSDARP00000123847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4Y1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000149359.2	xirp2b-204	352	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 5,431 bps, Translation length: 1,811 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000148561.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

Transcript: ENSDART00000148561.2 xirp2b-202

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Transcript: ENSDART00000148561.2 xirp2b-202

Summary

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