Transcript: ENSDART00000148505.2 mmaa-204

Description

metabolism of cobalamin associated A [Source:ZFIN;Acc:ZDB-GENE-070928-15]

Gene Synonyms

zgc:171657

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 9 variant alleles and maps to 81 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085021.6	mmaa-201	1684	403aa	ENSDARP00000079456.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4L3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148505.2	mmaa-204	684	189aa	ENSDARP00000124421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3C6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132932.2	mmaa-202	875	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000140144.2	mmaa-203	790	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 684 bps, Translation length: 189 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148505.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.