Transcript: ENSDART00000148495.2 riox1-202

Description

ribosomal oxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-041008-221]

Location

About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 422 variant alleles and maps to 158 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000097729.5	riox1-201	1701	544aa	ENSDARP00000088500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189319.1	riox1-203	1842	525aa	ENSDARP00000150721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000148495.2	riox1-202	1308	421aa	ENSDARP00000123984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,308 bps, Translation length: 421 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148495.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.