Transcript: ENSDART00000148485.2 calub-203

Description

calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]

Location

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 320 variant alleles and maps to 41 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000005405.8	calub-201	2541	315aa	ENSDARP00000025396.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5E6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127138.4	calub-202	1907	332aa	ENSDARP00000106302.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000148485.2	calub-203	729	214aa	ENSDARP00000124902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 729 bps, Translation length: 214 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148485.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.