Transcript: ENSDART00000148478.3 LIM2-201

Description

lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]

Location

About this transcript

This transcript has 5 exons, is annotated with 29 domains and features, is associated with 532 variant alleles and maps to 108 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148478.3	LIM2-201	1108	173aa	ENSDARP00000124893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BKW4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192979.1	LIM2-202	865	173aa	ENSDARP00000150246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BKW4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,108 bps, Translation length: 173 residues

Version

ENSDART00000148478.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.