Transcript: ENSDART00000148474.2 FXR1-201

Description

FMR1 autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]

Location

About this transcript

This transcript has 2 exons, is associated with 198 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149482.3	FXR1-203	2753	645aa	ENSDARP00000124192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000104478.4	FXR1-202	2737	622aa	ENSDARP00000095251.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QLR3-1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148474.2	FXR1-201	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 669 bps,

Version

ENSDART00000148474.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.