Transcript: ENSDART00000148453.1 gatm-203

Description

glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:NCBI gene;Acc:266799]

Gene Synonyms

agat, cb409, wu:fa08a06

Location

Chromosome 18: 36,068-40,317 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 222 variant alleles and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000036239.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052641.5	gatm-201	1974	422aa	ENSDARP00000052640.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QX52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148373.2	gatm-202	872	272aa	ENSDARP00000123872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4N8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148950.1	gatm-205	829	258aa	ENSDARP00000124368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3L4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148821.1	gatm-204	729	113aa	ENSDARP00000124158.1	Nonsense mediated decay	F8W4S0	-
ENSDART00000148453.1	gatm-203	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 856 bps,

Version

ENSDART00000148453.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148453.1 gatm-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000148453.1 gatm-203

Summary

About Us

Get help

Our sister sites

Follow us