Transcript: ENSDART00000148431.2 cln8-201

Description

CLN8 transmembrane ER and ERGIC protein [Source:NCBI gene (formerly Entrezgene);Acc:100136870]

Location

About this transcript

This transcript has 4 exons, is annotated with 28 domains and features, is associated with 318 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148431.2	cln8-201	1713	289aa	ENSDARP00000124599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190873.1	cln8-203	1490	272aa	ENSDARP00000151255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000149452.2	cln8-202	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,713 bps, Translation length: 289 residues

Version

ENSDART00000148431.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.