Transcript: ENSDART00000148406.2 PRKAG2-202

Description

protein kinase, AMP-activated, gamma 2 non-catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-060929-160]

Location

Chromosome 24: 28,293,304-28,381,404 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 1678 variant alleles and maps to 15 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000012625.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148618.3	PRKAG2-204	2577	330aa	ENSDARP00000125018.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5P9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000129174.4	PRKAG2-206	2977	436aa	ENSDARP00000109004.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJ49	-
ENSDART00000148406.2	PRKAG2-202	1024	259aa	ENSDARP00000124183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149015.3	PRKAG2-201	900	215aa	ENSDARP00000124496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000149589.2	PRKAG2-205	772	60aa	ENSDARP00000124523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000148419.2	PRKAG2-203	897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,024 bps, Translation length: 259 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148406.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

Transcript: ENSDART00000148406.2 PRKAG2-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000148406.2 PRKAG2-202

Summary

About Us

Get help

Our sister sites

Follow us