Transcript: ENSDART00000148348.2 NXPH1-201

Description

neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]

Location

Chromosome 19: 37,925,616-37,926,425 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 3 domains and features, is associated with 230 variant alleles and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000033447.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000180872.1	NXPH1-204	3215	272aa	ENSDARP00000151811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N0Y9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000042276.6	NXPH1-203	3072	272aa	ENSDARP00000042275.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N0Y9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189289.1	NXPH1-202	2266	272aa	ENSDARP00000157348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N0Y9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148348.2	NXPH1-201	810	252aa	ENSDARP00000117115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 810 bps, Translation length: 252 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000148348.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148348.2 NXPH1-201

Summary

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Transcript: ENSDART00000148348.2 NXPH1-201

Summary

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