Transcript: ENSDART00000148277.2 hnrnpdl-205

Description

heterogeneous nuclear ribonucleoprotein D-like [Source:ZFIN;Acc:ZDB-GENE-040426-2717]

Gene Synonyms

hnrpdl, wu:fa11d08, zgc:66169

Location

Chromosome 10: 5,017,216-5,022,176 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 498 variant alleles and maps to 139 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003429.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020631.9	hnrnpdl-201	1449	296aa	ENSDARP00000005968.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXN2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189017.1	hnrnpdl-206	1343	296aa	ENSDARP00000152490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXN2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148277.2	hnrnpdl-205	789	157aa	ENSDARP00000120368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC42	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000137853.2	hnrnpdl-203	889	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000132284.3	hnrnpdl-202	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000146539.2	hnrnpdl-204	428	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 789 bps, Translation length: 157 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000148277.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148277.2 hnrnpdl-205

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Transcript: ENSDART00000148277.2 hnrnpdl-205

Summary

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