Transcript: ENSDART00000148242.4 RNASEH1-201

Description

ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]

Location

Chromosome 20: 30,378,803-30,383,900 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 76 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042571.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062441.5	RNASEH1-202	1281	276aa	ENSDARP00000062440.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169140.3	RNASEH1-204	1117	276aa	ENSDARP00000140924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG94	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148242.4	RNASEH1-201	835	241aa	ENSDARP00000117677.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153019.2	RNASEH1-203	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 835 bps, Translation length: 241 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148242.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148242.4 RNASEH1-201

Summary

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Transcript: ENSDART00000148242.4 RNASEH1-201

Summary

About Us

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